Earthworm Data and Research Use

It is the aim of the Earthworm Society of Britain (ESB) to increase our understanding of earthworms in the UK and the ecological impact that these animals have on their environment. This involves ensuring that earthworm records are shared widely and are available for other potential data users to put the data collected by earthworm recorders and research institutions to good use.

So, exactly what happens to earthworm records after they have been submitted to the ESB or iRecord?

Journey of an earthworm record

Processing

Records are processed and subjected to NERS verification protocols. Where necessary, queries are sent to recorders. Records that are processed through iRecord are then available for both the Earthworm Society of Britain and the relevant Local Environmental Records Centre to download.

Collation

Records are added to the relevant dataset. The following datasets are currently managed by the ESB:

  1. Earthworm Research Group (UCLan) earthworm records (Great Britain)
  2. Environment Agency Eiseniella tetraedra records (England)
  3. Forest Research Earthworm Records (England)
  4. National Earthworm Recording Scheme records (Channel Islands)
  5. National Earthworm Recording Scheme records (Great Britain)
  6. National Earthworm Recording Scheme records (N. Ireland)
  7. Soil Biodiversity Group (NHM) earthworm records (Great Britain)

Dissemination

The ESB then shares these records:

  • Locally by emailing all earthworm records to all of the Local Environmental Records Centres in the UK on an annual basis.
  • Nationally through bi-annual uploads of ESB datasets to the NBN Atlas
  • Internationally by allowing the NBN to also make its earthworm datasets available through the Global Biodiversity Information Facility.

Open Data Agreement for Earthworm Records

The Earthworm Society of Britain (ESB) actively encourages the use of its data and hopes that it can be used to further the current understanding of earthworms, both nationally and internationally. The Society is always interested to hear about how others have used its data (whether for use in science, sociology, art or anything else) and is glad to have produced a resource that is being put to use.

It asks all its data suppliers to read the information below and only submit records to the ESB if they are happy with the data sharing policy outlined.

Access to ESB earthworm records

The ESB has an open data policy, allowing open access to its earthworm records with no constraints to the use of the data and ensuring records are available at the full resolution they are accepted at.

This is achieved through the submission of its databases to the NBN Atlas. As a Data Sharing Partner of the NBN, the ESB is committed to ensuring this dataset is updated on a regular basis (and no less than twice per year).

Datasets that are managed by the ESB can be found through the Data Partner webpage for the ESB on the NBN Atlas.

Furthermore, it allows its records to be made available through:

  • Global Biodiversity Information Facility (GBIF) (an international open data infrastructure, funded by governments) in accordance with their vision: “A world in which biodiversity information is freely and universally available for science, society and a sustainable future.”
  • Local Environmental Records Centres (LERCs) (regional not-for-profit organisations that collect, collate and manage information on the natural environment for a defined geographic area). ESB data is submitted to LERCs annually, though no formal data sharing agreements exist.

It should be mentioned that The Earthworm Society of Britain was the winner of the John Sawyer NBN Open Data Award 2019. Visit the NBN Awards pages for more information.

Licences and attribution

All data submitted to the Earthworm Society of Britain is assigned a Creative Commons Attribution 4.0 International licence as it is recommended for maximum dissemination and use of licensed materials.

It allows others to:

  • Share — copy and redistribute the material in any medium or format for any purpose, even commercially.
  • Adapt — remix, transform, and build upon the material for any purpose, even commercially

(The licensor cannot revoke these freedoms as long as the licence terms are followed.)

Under the following terms:

  • Attribution — Users must give appropriate credit, provide a link to the licence, and indicate if changes were made. You may do so in any reasonable manner, but not in any way that suggests the licensor endorses you or your use.
  • No additional restrictions — Users may not apply legal terms or technological measures that legally restrict others from doing anything the licence permits.

Use of ESB datasets in scientific literature

The following research papers are cited through GBIF as using ESB data:

Transitions between biomes are common and directional in Bombacoideae (Malvaceae)

Zizka, A. Carvalho?Sobrinho, J.G. Pennington, R.T. Queiroz, L.P. Alcantara, S. Baum, D.A. Bacon, C.D. Antonelli, A. (2020) Journal of Biogeography

Aim: To quantify evolutionary transitions between tropical evergreen rain forest and seasonally dry biomes, to test whether biome transitions affect lineage diversification and to examine the robustness of these results to methodological choices. Location: The tropics. Time period: The Cenozoic. Major taxa studied: The plant subfamily Bombacoideae (Malvaceae). Methods: We inferred ancestral biomes based on a fossil?dated molecular phylogeny of 103 species (59% of the clade) and recorded the number of transitions among biomes using biogeographical stochastic mapping based on the dispersal?extinction?cladogenesis model. We then estimated diversification rates using state?specific speciation and extinction rate (SSE) methods. Furthermore, we tested the sensitivity of the results to model choice, phylogenetic uncertainty, measurement error and biome definition. Results: We found numerous transitions from evergreen rain forest to seasonally dry biomes, and fewer in the opposite direction. These results were robust to methodological choices. Biome type did not influence diversification rates, although this result was subject to uncertainty, especially related to model choice and biome definition. Main conclusions: Our results contradict the idea of evolutionary biome conservatism in Bombacoideae, and support previous findings that evergreen rain forests serve as a source for the flora of seasonally dry biomes. The impact of biome classification and biome definition on the results suggest caution when using a biome concept for biogeographical reconstruction and diversification rate analysis.

Earthworms (Oligochaeta: Lumbricidae) of Interior Alaska 

Booysen, M. Sikes, D. Bowser, M. Andrews, R. (2018) Biodiversity Data Journal

Earthworms in the family Lumbricidae in Alaska, which are known from coastal regions, primarily in south-central and south-eastern Alaska, are thought to be entirely non-native and have been shown to negatively impact previously earthworm-free ecosystems in study regions outside of Alaska. Despite occasional collections by curious citizens, there had not been a standardised earthworm survey performed in Interior Alaska and no published records exist of earthworms species from this region. Mustard extraction was used to sample six locations that differed in elevation, mostly in the College region of Fairbanks, Alaska. Two of the six locations yielded earthworms. There was no relationship between earthworm abundance and elevation (p = 0.087), although our sample size was small. Our sampling, combined with specimens in the University of Alaska Museum, has documented four exotic species and one presumed native species of lumbricid earthworms in Interior Alaska.

Combined multi-gene backbone tree for the genus Coniochaeta with two new species from Uzbekistan

MILAN C. SAMARAKOON, YUSUFJON GAFFOROV, NINGGUO LIU, SAJEEWA S. N. MAHARACHCHIKUMBURA, JAYARAMA D. BHAT, JIAN-KUI LIU, ITTHAYAKORN PROMPUTTHA, KEVIN D. HYDE (2018) Phytotaxa

The genus Coniochaeta is an important ascomycete because its members live in diversified habitats and nutritional modes. In this study, two new species, C. acaciae and C. coluteae, are introduced from dead branches of Acacia sp. and Colutea paulsenii Freyn (both Fabaceae) respectively from Uzbekistan, based on morphological and phylogenetic studies. Analyses of combined ITS and LSU sequence data with Genealogical Concordance Phylogenetic Species Recognition (GCPSR) and comparison of similar taxa, provide evidences for placement of these new species in Coniochaeta, as distinct lineages.

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